Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902121.1_cds_XP_016452132.1_46402
CDS Infomation

[gene=LOC107776733] [db_xref=GeneID:107776733] [protein=luminal-binding protein 5-like] [protein_id=XP_016452132.1] [location=complement(join(67107..67602,67705..67787,67906..68060,68170..68649,68974..69216,69297..69511,69600..69867,70998..71058))] [gbkey=CDS]
Sequence

ATGGGTGGCGGCTACTGGAGGCGAAACAGTTCTCTGGTGGTGCTAGCAATCGTTTTATTC
GGTTGTCTTTCTGCACTTTCGATTGCCAAAGAGGAGGCAACCAAACTAGGAACAGTTATT
GGAATAGACCTTGGGACTACCTATTCTTGTGTTGGAGTTTATAAAAATGGTCATGTTGAG
ATTATAGCCAATGACCAGGGAAACCGTATTACGCCATCATGGGTTGGGTTCACCGACGGT
GAGAGGTTGATTGGTGAGGCAGCAAAGAACCAGGCGGCTGTCAACCCCGAAAGAACCATC
TTTGATGTTAAGAGGCTTATTGGAAGAAAGTTTGAGGACAAGGAAGTTCAGAAGGATATG
AAGCTTGTCCCATACAAGATCGTGAACAAGGATGGGAAGCCTTACATACAAGTCAAAATC
AAGGACGTAGAAGTTAAGGTATTTAGTCCTGAGGAAATCAGTGCAATGATTCTGATAAAG
ATGAAGGAGACAGCCGAAGCTTTCCTTGGAAAGAAAATTAAGGATGCTGTAGTAACTGTT
CCCGCATATTTCAATGATGCGCAAAGGCAGGCTACAAAGGATGCCGGTGTTATTGCTGGC
TTAAATGTTGCAAGAATTATTAATGAACCAACAGCAGCAGCCATTGCTTATGGATTGGAC
AAGAAAGGTGGTGAGAAGAACATTCTCGTCTTTGACCTTGGTGGTGGAACATTTGATGTC
AGTGTCCTGACTATTGATAATGGTGTGTTTGAGGTTCTGTCCACAAATGGAGACACCCAT
CTTGGAGGCGAGGACTTTGATCAGAGGATTATGGAATACTTTATCAAATTGATTAAGAAG
AAGCACGGGAAGGACATCAGCAAGGACAACAGAGCTCTTGGTAAGCTAAGAAGAGAAGCT
GAGCGTGCCAAGAGGGCATTGAGTAGCCAACACCAGGTCCGAGTTGAGATCGAATCGCTT
TTCGATGGTACTGACTTCTCTGAACCATTGACCCGTGCTCGCTTCGAGGAGTTGAACAAT
GATCTATTCAGAAAGACAATGGGACCCGTGAAGAAGGCAATGGAAGATGCTGGATTGGAG
AAGAACCAAATTGACGAGATAGTTCTTGTTGGTGGAAGCACTAGAATTCCAAAGGTGCAA
CAGCTCCTGAAGGACTACTTTGATGGAAAGGAGCCTAACAAGGGTGTGAATCCTGATGAG
GCAGTTGCATATGGTGCTGCTGTTCAAGGTGGTATCTTAAGCGGAGAGGGTGGTGACGAA
ACTAAAGATATCCTTCTCCTGGATGTTGCTCCTCTCACCCTTGGTATTGAAACTGTTGGT
GGTGTGATGACCAAATTGATTCCTAGGAACACTGTCATCCCAACCAAGAAGTCTCAAGTC
TTCACTACTTACCAAGACCAGCAGACCACTGTCACCATTTCGGTTTATGAAGGAGAAAGG
AGTCTTACTAAGGACTGCAGGCTCCTTGGAAATTTTGATCTGACTGGAATTCCTCCAGCT
CCAAGGGGAACACCTCAGATTGAGGTTACCTTTGAAGTTGATGCAAACGGTATTTTGAAT
GTCAAAGCAGAAGACAAGGGTAGTGGTAAATCAGAGAAGATTACCATTACAAATGACAAG
GGCCGCTTAAGCCAAGAAGAGATTGAACGAATGGTTCGTGAGGCAGAAGAGTTTGCCGAG
GAAGACAAGAAGGTGAAGGAGAGGATTGACGCCCGTAATGGTCTTGAAACCTATGTGTAC
AACATGAAAAACCAGATTAACGACAAGGACAAGCTTGCTGACAAGCTCGAGTCTGATGAG
AAGGAGAAGATTGAGACCGCCGTAAAGGAAGCCCTCGAGTGGCTGGATGACAACCAGAGC
GCTGAGAAAGAGGACTACGAAGAGAAACTGAAAGAGGTCGAGGCAGTATGCAATCCAATC
ATCACAGCTGTTTATCAAAAATCAGGTGGAGCCTCAGGTGGTTCATCAGAAGAAGAAGAA
GATGGACATGATGAACTGTAG

Peptide Sequence

PEP ID

XP_016452132.1
PEP Infomation

PREDICTED: luminal-binding protein 5-like [Nicotiana tabacum]
Sequence

MGGGYWRRNSSLVVLAIVLFGCLSALSIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVE
IIANDQGNRITPSWVGFTDGERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQKDM
KLVPYKIVNKDGKPYIQVKIKDVEVKVFSPEEISAMILIKMKETAEAFLGKKIKDAVVTV
PAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDV
SVLTIDNGVFEVLSTNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREA
ERAKRALSSQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLE
KNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDE
TKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVTISVYEGER
SLTKDCRLLGNFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGSGKSEKITITNDK
GRLSQEEIERMVREAEEFAEEDKKVKERIDARNGLETYVYNMKNQINDKDKLADKLESDE
KEKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQKSGGASGGSSEEEE
DGHDEL

Transcript Sequence

Gene sequence data has not been registered.